These files can be found in ${DB}/EBI_NUCLEOTIDE_DB/mpi-blast_DB on NGS site offereing mpiBLAST. The suffix "upd" refers to the updates of the corresponding dataclass file since the latest quarterly release.
Breakdown by Dataclass.
| |
| File |
Description |
| est est_upd |
Expressed Sequence Tag |
| gss gss_upd |
Genome Sequence Scan |
| htc htc_upd |
High Throughput cDNA sequencing |
| htg htg_upd |
High Throughput Genome sequencing |
| pat pat_upd |
Patents |
| std std_up |
Standard |
| sts sts_upd |
Sequence Tagged Site |
| tpa tpa_upd |
Third Party Annotation |
| wgs wgs_upd |
Whole Genome Shotgun |
| con_upd |
|
| ann_upd |
|
|
|
